An enhancement of the smith -waterman algorithm applied in query by humming for music information retrieval (Record no. 25390)

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fixed length control field 03406nam a2200301Ia 4500
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control field 76934
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control field ft6136
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20251107094600.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 190311n 000 0 eng d
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Description conventions rda
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Language code of text/sound track or separate title engtag
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Classification number QA76.9 M34 2013
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Personal name Regine B. Magbiray and Antonio S. Ronda Jr.
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Title An enhancement of the smith -waterman algorithm applied in query by humming for music information retrieval
264 ## - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE
Place of production, publication, distribution, manufacture .
Name of producer, publisher, distributor, manufacturer .
Date of production, publication, distribution, manufacture, or copyright notice c2013
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Other physical details Undergraduate Thesis: (BSCS major in Computer Science) - Pamantasan ng Lungsod ng Maynila, 2013.
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Media type term unmediated
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Formatted contents note ABSTRACT: The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadratic time and space complexity. It also neglects some data in its computation and cannot handle large deletion in a given pattern for comparison. As a result, many algorithmic and architectural enhancements have been proposed to solve this problem, but at the cost of reduced sensitivity in the algorithms or significant expense in hardware, respectively. Hence, there exists a need to enhancement. The researchers applied divide and conquer strategy to solve its computational time drawback. In handling large deletion problem, incremental gap alignment was used to solve missed hits of match and consider the large gap brought by the deletion. Finally, the researchers compared the enhanced algorithm with the original Smith-Waterman. As for the result, the enhanced algorithm performs faster by up to 75 percent making its complexity to O (mn/t). In handling large deletion and missed data in the matrix, the enhanced algorithm improved its way in handling the subsequence and collects all information for the results to be outputted to handle large deletion and missed data in the matrix.
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Terms governing access 5
520 ## - SUMMARY, ETC.
Summary, etc. ABSTRACT: The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadratic time and space complexity. It also neglects some data in its computation and cannot handle large deletion in a given pattern for comparison. As a result, many algorithmic and architectural enhancements have been proposed to solve this problem, but at the cost of reduced sensitivity in the algorithms or significant expense in hardware, respectively. Hence, there exists a need to enhancement. The researchers applied divide and conquer strategy to solve its computational time drawback. In handling large deletion problem, incremental gap alignment was used to solve missed hits of match and consider the large gap brought by the deletion. Finally, the researchers compared the enhanced algorithm with the original Smith-Waterman. As for the result, the enhanced algorithm performs faster by up to 75 percent making its complexity to O (mn/t). In handling large deletion and missed data in the matrix, the enhanced algorithm improved its way in handling the subsequence and collects all information for the results to be outputted to handle large deletion and missed data in the matrix.
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Classification Filipiniana
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Terms governing use and reproduction 5
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Institution code [OBSOLETE] lcc
Item type Thesis/Dissertation
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          Filipiniana-Thesis PLM PLM Archives     QA76.9 M34 2013 FT6136 2025-09-20 Thesis/Dissertation

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